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  5. Spa_g04255

Spa_g04255


Description : bZIP class-L transcription factor & original description: none


Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00190730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
AT2G21230 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.02 OrthoFinder output from all 47 species
Als_g22106 ATBZIP61, BZIP61 bZIP class-L transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16590 No alias bZIP class-L transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19337 No alias bZIP class-I transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene69117.t1 Aspi01Gene69117 bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70939.t1 ATBZIP61,... bZIP class-L transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0170.g055623 ATBZIP34, BZIP34 bZIP class-L transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g05678 No alias bZIP class-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01833 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03872 No alias bZIP class-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04704 No alias bZIP class-L transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24033 No alias bZIP class-L transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g41820.1 LOC_Os04g41820 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Mp3g00600.1 No alias transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Mp7g00210.1 No alias transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Ore_g28369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01054 No alias bZIP class-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g103875.1.1 Solyc01g103875 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034227 tRNA thio-modification IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!