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  5. Spa_g04232

Spa_g04232


Description : component *(MED26) of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04232
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00061970 evm_27.TU.AmTr_v1... Probable mediator of RNA polymerase II transcription... 0.02 OrthoFinder output from all 47 species
Ala_g01712 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ala_g21085 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Aop_g03202 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07207.t1 Aspi01Gene07207 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69177.t1 Aspi01Gene69177 component *(MED26) of MEDIATOR transcription... 0.06 OrthoFinder output from all 47 species
Aspi01Gene69253.t1 Aspi01Gene69253 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Dac_g15449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03915 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Dde_g23477 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Ehy_g25014 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
LOC_Os05g34210.1 LOC_Os05g34210 component MED26 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Nbi_g27629 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Pir_g59707 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e010865_P001 Zm00001e010865 component MED26 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Zm00001e027059_P003 Zm00001e027059 component MED26 of MEDIATOR transcription co-activator complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 150 199
No external refs found!