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  5. Spa_g04208

Spa_g04208 (SCRM2, ICE2)


Aliases : SCRM2, ICE2

Description : transcription factor *(ICE1/2) & original description: none


Gene families : OG0001330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00170610 ATICE1, ICE1,... External stimuli response.temperature.ICE-CBF cold... 0.04 OrthoFinder output from all 47 species
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G65640 bHLH093 beta HLH protein 93 0.03 OrthoFinder output from all 47 species
Aev_g15012 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04435 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g15617 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14438 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene03868.t2 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29400.t1 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66445.t1 ATICE1, ICE1,... transcription factor *(ICE1/2) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0007.g010652 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-1947 0.07 OrthoFinder output from all 47 species
Cba_g26604 ATICE1, ICE1, SCRM bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75218 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.16G023800.1 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G086600.1 SCRM2, ICE2,... bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dde_g02958 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g23752 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17361 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004405001 bHLH093 RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
GSVIVT01008637001 ATICE1, ICE1, SCRM External stimuli response.temperature.ICE-CBF cold... 0.06 OrthoFinder output from all 47 species
GSVIVT01009234001 bHLH093 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01032998001 ATICE1, ICE1, SCRM External stimuli response.temperature.ICE-CBF cold... 0.05 OrthoFinder output from all 47 species
Gb_30129 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g32100.1 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.05 OrthoFinder output from all 47 species
Len_g04800 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.06 OrthoFinder output from all 47 species
MA_20585g0010 SCRM2, ICE2 transcription factor (bHLH). transcription factor (ICE1|2) 0.02 OrthoFinder output from all 47 species
MA_448849g0010 ATICE1, ICE1, SCRM transcription factor (bHLH). transcription factor (ICE1|2) 0.04 OrthoFinder output from all 47 species
MA_63506g0010 SCRM2, ICE2 transcription factor (bHLH). transcription factor (ICE1|2) 0.03 OrthoFinder output from all 47 species
Mp4g04920.1 ATICE1, ICE1, SCRM transcription factor (bHLH). transcription factor (ICE1|2) 0.03 OrthoFinder output from all 47 species
Msp_g13280 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32982 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001696 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-2049 0.03 OrthoFinder output from all 47 species
Sam_g12143 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g118310.4.1 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.02 OrthoFinder output from all 47 species
Solyc04g076845.1.1 bHLH093, Solyc04g076845 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc12g088130.3.1 bHLH093, Solyc12g088130 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g53770 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44648 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013304_P003 bHLH093, Zm00001e013304 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e021526_P001 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 499 541
No external refs found!