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  5. Spa_g02553

Spa_g02553


Description : not classified & original description: none


Gene families : OG0000522 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000522_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g02553
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT1G18990 No alias Protein of unknown function, DUF593 0.02 OrthoFinder output from all 47 species
Ala_g12842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G082600.1 Ceric.11G082600 not classified & original description: pacid=50595475... 0.02 OrthoFinder output from all 47 species
LOC_Os01g56790.1 LOC_Os01g56790 myosin receptor (MyoB) 0.03 OrthoFinder output from all 47 species
MA_1121359g0010 No alias myosin receptor (MyoB) 0.05 OrthoFinder output from all 47 species
Msp_g25228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g106100.2.1 Solyc01g106100 Protein FLOURY 1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e039013_P002 Zm00001e039013 myosin receptor (MyoB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!