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  5. Spa_g02450

Spa_g02450 (VIL1, VRN5)


Aliases : VIL1, VRN5

Description : PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone methylation complex & original description: none


Gene families : OG0001143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g02450

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00226190 VEL1, VIL2,... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00231530 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g39230 VIN3 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Als_g46672 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.05 OrthoFinder output from all 47 species
Aob_g26103 VIL1, VRN5 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Aop_g22500 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Dac_g37958 VIL1, VRN5 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.05 OrthoFinder output from all 47 species
Dcu_g35623 VEL1, VIL2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11907 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
LOC_Os05g05310.2 VIL1, VRN5,... PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.02 OrthoFinder output from all 47 species
Pnu_g27823 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 1 97
No external refs found!