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  5. Spa_g01731

Spa_g01731


Description : component *(NUF2) of NDC80 outer kinetochore complex & original description: none


Gene families : OG0006515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g01731
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00016840 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder output from all 47 species
Aop_g04468 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0027.g023538 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.04 OrthoFinder output from all 47 species
Ceric.38G047400.1 Ceric.38G047400 component *(NUF2) of NDC80 outer kinetochore complex &... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.65 No alias Cell cycle.mitosis and meiosis.chromosome... 0.04 OrthoFinder output from all 47 species
Cre01.g008450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.04 OrthoFinder output from all 47 species
Dcu_g10000 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.07 OrthoFinder output from all 47 species
Gb_15278 No alias component NUF2 of NDC80 outer kinetochore complex 0.08 OrthoFinder output from all 47 species
Mp3g15760.1 No alias component NUF2 of NDC80 outer kinetochore complex 0.05 OrthoFinder output from all 47 species
Ppi_g02000 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e006361_P001 Zm00001e006361 component NUF2 of NDC80 outer kinetochore complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEA Interproscan
CC GO:0031262 Ndc80 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005549 Kinetochore_Nuf2_N 6 152
No external refs found!