1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g01691

Spa_g01691


Description : not classified & original description: none


Gene families : OG0000791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000791_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g01691
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263410 evm_27.TU.AmTr_v1... Uncharacterized protein At2g39795, mitochondrial... 0.1 OrthoFinder output from all 47 species
AT3G55605 No alias Mitochondrial glycoprotein family protein 0.06 OrthoFinder output from all 47 species
AT5G02050 No alias Mitochondrial glycoprotein family protein 0.09 OrthoFinder output from all 47 species
Adi_g077568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g114006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g00867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g00872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15202 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Als_g10589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00353 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g00459 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Aop_g27103 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene62093.t1 Aspi01Gene62093 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056596 No alias not classified & original description: CDS=77-799 0.04 OrthoFinder output from all 47 species
Cba_g34398 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G126700.1 Ceric.01G126700 not classified & original description: pacid=50591892... 0.04 OrthoFinder output from all 47 species
Ceric.06G023100.1 Ceric.06G023100 not classified & original description: pacid=50619513... 0.06 OrthoFinder output from all 47 species
Ceric.10G002400.1 Ceric.10G002400 not classified & original description: pacid=50611676... 0.09 OrthoFinder output from all 47 species
Cre10.g447100 No alias No description available 0.04 OrthoFinder output from all 47 species
Dac_g11965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g41118 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016468001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.09 OrthoFinder output from all 47 species
GSVIVT01017565001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_30186 No alias Uncharacterized protein At2g39795, mitochondrial... 0.05 OrthoFinder output from all 47 species
Gb_41394 No alias Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
LOC_Os01g05010.1 LOC_Os01g05010 Uncharacterized protein At2g39795, mitochondrial... 0.05 OrthoFinder output from all 47 species
LOC_Os05g38210.1 LOC_Os05g38210 Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
LOC_Os06g22070.1 LOC_Os06g22070 Uncharacterized protein At2g39795, mitochondrial... 0.09 OrthoFinder output from all 47 species
LOC_Os08g34130.1 LOC_Os08g34130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g04210.1 LOC_Os12g04210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g04606 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g15788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00853 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427007g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_123491g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.08 OrthoFinder output from all 47 species
MA_5294g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
Nbi_g00567 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g01706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c12_23320V3.1 Pp3c12_23320 Mitochondrial glycoprotein family protein 0.02 OrthoFinder output from all 47 species
Sam_g11538 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11539 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g17949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g079930.3.1 Solyc03g079930 Uncharacterized protein At2g39795, mitochondrial... 0.05 OrthoFinder output from all 47 species
Solyc06g065800.3.1 Solyc06g065800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g20258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016932_P001 Zm00001e016932 Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
Zm00001e036951_P001 Zm00001e036951 Uncharacterized protein At2g39795, mitochondrial... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003428 MAM33 65 262
No external refs found!