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  5. Spa_g01564

Spa_g01564 (OPCL1)


Aliases : OPCL1

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g01564

Target Alias Description ECC score Gene Family Method Actions
AT1G20480 No alias AMP-dependent synthetase and ligase family protein 0.03 OrthoFinder output from all 47 species
Cba_g30890 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_21821 OPCL1 OPC-8:CoA synthetase 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015443 No alias not classified & original description: CDS=406-2094 0.02 OrthoFinder output from all 47 species
Solyc11g069050.2.1 Solyc11g069050 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 1 86
No external refs found!