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  5. Spa_g01282

Spa_g01282 (ATSYP52, SYP52)


Aliases : ATSYP52, SYP52

Description : Qc-type SYP5-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g01282
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Ceric.23G022500.1 ATSYP52, SYP52,... Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ehy_g02128 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
GSVIVT01005339001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01037735001 ATSYP51, SYP51 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Mp3g14430.1 ATSYP52, SYP52 SYP5 group Qc-type SNARE protein 0.03 OrthoFinder output from all 47 species
Spa_g30439 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Zm00001e022242_P001 ATSYP52, SYP52,... SYP5 group Qc-type SNARE protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!