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  5. Spa_g00955

Spa_g00955


Description : storage vacuole protein sorting receptor *(RMR) & original description: none


Gene families : OG0000625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g00955

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00203080 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.05 OrthoFinder output from all 47 species
Aspi01Gene07227.t1 Aspi01Gene07227 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31388.t1 Aspi01Gene31388 storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene31388.t2 Aspi01Gene31388 storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
Ehy_g01137 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Ehy_g04700 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
MA_106464g0010 No alias vacuolar sorting receptor (RMR) 0.04 OrthoFinder output from all 47 species
Mp4g04900.1 No alias vacuolar sorting receptor (RMR) 0.02 OrthoFinder output from all 47 species
Pir_g19205 No alias storage vacuole protein sorting receptor *(RMR) &... 0.05 OrthoFinder output from all 47 species
Pnu_g31985 No alias storage vacuole protein sorting receptor *(RMR) &... 0.05 OrthoFinder output from all 47 species
Spa_g19126 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Zm00001e040628_P001 Zm00001e040628 vacuolar sorting receptor (RMR) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR003137 PA_domain 85 141
IPR001841 Znf_RING 229 272
No external refs found!