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  5. Spa_g00697

Spa_g00697


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g00697
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT5G52140 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g02321 No alias E3 ubiquitin ligase *(EOD1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27417 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01032082001 BB2, BB Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_32928 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10428085g0030 AFH14 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e000545_P002 BB2, BB, Zm00001e000545 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e029867_P003 BB2, BB, Zm00001e029867 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e038893_P003 BB2, BB, Zm00001e038893 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 230 270
No external refs found!