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  5. Spa_g00388

Spa_g00388


Description : not classified & original description: none


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g00388

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Aop_g04410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25822 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g34229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23692 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g31468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g21320.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g12126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g22836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g082870.3.1 Solyc08g082870 Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Zm00001e033547_P003 Zm00001e033547 component Tic32 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 27 236
No external refs found!