Spa_g00335 (ATPDX1.3, RSR4,...)


Aliases : ATPDX1.3, RSR4, ATPDX1, PDX1.3, PDX1

Description : synthase component of pyridoxal 5-phosphate synthase complex & original description: none


Gene families : OG0001625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001625_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g00335
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT3G16050 ATPDX1.2, A37, PDX1.2 pyridoxine biosynthesis 1.2 0.15 OrthoFinder output from all 47 species
Aev_g13246 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.11 OrthoFinder output from all 47 species
Aop_g07922 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene05123.t1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000254.47 ATPDX1.3, RSR4,... Coenzyme metabolism.pyridoxalphosphate... 0.01 OrthoFinder output from all 47 species
Cre15.g643550 ATPDX1.3, RSR4,... Coenzyme metabolism.pyridoxalphosphate... 0.01 OrthoFinder output from all 47 species
GSVIVT01017087001 ATPDX1.3, RSR4,... Coenzyme metabolism.pyridoxalphosphate... 0.13 OrthoFinder output from all 47 species
Gb_23607 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.02 OrthoFinder output from all 47 species
Pir_g12484 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR033755 PdxS/SNZ_N 21 226
No external refs found!