Ore_g45466


Description : histone demethylase *(KDM3) & original description: none


Gene families : OG0000328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g45466

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00232350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00058780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.04 OrthoFinder output from all 47 species
AT4G00990 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g007698 No alias auxiliary component *(JMJ24) of COMPASS histone... 0.03 OrthoFinder output from all 47 species
Adi_g009709 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020057 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059802 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086369 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109477 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g113340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113607 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11073 No alias histone demethylase *(KDM3) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g11281 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13468 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20293 No alias histone demethylase *(KDM3) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g54566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09074 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05543 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19024 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70469 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42684.t1 Aspi01Gene42684 histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020487 No alias histone demethylase *(KDM3) & original description: CDS=110-3982 0.04 OrthoFinder output from all 47 species
Azfi_s0034.g025236 No alias histone demethylase *(KDM3) & original description: CDS=125-3187 0.03 OrthoFinder output from all 47 species
Azfi_s0100.g044279 No alias histone demethylase *(KDM3) & original description: CDS=159-2921 0.04 OrthoFinder output from all 47 species
Azfi_s0548.g076441 No alias histone demethylase *(KDM3) & original description: CDS=709-3096 0.03 OrthoFinder output from all 47 species
Cba_g04079 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05973 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31854 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G031200.1 Ceric.06G031200 histone demethylase *(KDM3) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.11G069000.1 Ceric.11G069000 histone demethylase *(KDM3) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.21G078400.1 Ceric.21G078400 histone demethylase *(KDM3) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.23G014800.1 Ceric.23G014800 histone demethylase *(KDM3) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g14457 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g16289 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12281 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41882 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09266 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031115001 No alias Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os02g01940.1 LOC_Os02g01940 histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
LOC_Os03g31594.1 LOC_Os03g31594 histone demethylase (KDM3). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species
Len_g08738 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12082 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14814 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56752 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04275 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40363 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
MA_103030g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
MA_126442g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
MA_136209g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species
MA_218662g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
MA_8576373g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g16206 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19356 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25890 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05897 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19186 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02849 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15776 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64830 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04006 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05933 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g11101 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31029 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g17510 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28431 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29418 No alias auxiliary component *(JMJ24) of COMPASS histone... 0.04 OrthoFinder output from all 47 species
Sam_g29690 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40489 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51855 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g082400.4.1 Solyc02g082400 histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
Solyc03g083240.4.1 Solyc03g083240 histone demethylase (KDM3). transcription factor (JUMONJI) 0.05 OrthoFinder output from all 47 species
Spa_g48969 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17158 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010541_P001 Zm00001e010541 histone demethylase (KDM3) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 922 1000
IPR014977 WRC_dom 17 54
IPR018866 Znf-4CXXC_R1 249 317
No external refs found!