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  5. Aev_g18916

Aev_g18916


Description : mRNA helicase *(RH31) & original description: none


Gene families : OG0001618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g18916

Target Alias Description ECC score Gene Family Method Actions
AT1G63250 No alias DEA(D/H)-box RNA helicase family protein 0.05 OrthoFinder output from all 47 species
AT5G08610 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Ala_g06941 No alias mRNA helicase *(RH31) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06184.t1 Aspi01Gene06184 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0205.g057731 No alias mRNA helicase *(RH31) & original description: CDS=150-1823 0.03 OrthoFinder output from all 47 species
Cba_g25132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12157 No alias mRNA helicase *(RH31) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g33520.1 LOC_Os06g33520 DEAD-box ATP-dependent RNA helicase 31 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Msp_g08017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01045 No alias mRNA helicase *(RH31) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 688 789
IPR011545 DEAD/DEAH_box_helicase_dom 462 636
No external refs found!