Description : not classified & original description: none
Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00049p00200350 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00067p00185510 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AT5G40490 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g041167 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g060246 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g085912 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g116756 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g13552 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g08511 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g08530 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g09868 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g24129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g26133 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g12260 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g10341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene47653.t2 | Aspi01Gene47653 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0004.g008625 | No alias | not classified & original description: CDS=712-1971 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g33385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g18227 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g03669 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g03771 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g07789 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g16051 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01030120001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
MA_93349g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g05437 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g00898 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g29827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g37589 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo101375 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g093340.3.1 | Solyc02g093340 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g045240.3.1 | Solyc07g045240 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g090520.3.1 | Solyc09g090520 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g04604 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g07867 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g08507 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e030652_P001 | Zm00001e030652 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
BP | GO:0001510 | RNA methylation | IEP | HCCA |
MF | GO:0004743 | pyruvate kinase activity | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | HCCA |
MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0030488 | tRNA methylation | IEP | HCCA |
MF | GO:0030955 | potassium ion binding | IEP | HCCA |
MF | GO:0031420 | alkali metal ion binding | IEP | HCCA |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
CC | GO:0034708 | methyltransferase complex | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
CC | GO:0043527 | tRNA methyltransferase complex | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
No external refs found! |