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  5. Ore_g44221

Ore_g44221 (PAPS1)


Aliases : PAPS1

Description : poly(A) RNA polymerase & original description: none


Gene families : OG0000731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g44221
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Als_g33647 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08646 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037202_P005 PAP(IV), nPAP,... poly(A) RNA polymerase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEA Interproscan
BP GO:0043631 RNA polyadenylation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 85 173
IPR007010 PolA_pol_RNA-bd_dom 366 426
IPR007012 PolA_pol_cen_dom 19 363
No external refs found!