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  4. Sequence
  5. Ore_g43420

Ore_g43420


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g43420
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT1G19170 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G23900 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G06770 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G42950 No alias Pectin lyase-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT4G23820 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g044640 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110576 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13749 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20477 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11182 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29798 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20891.t1 Aspi01Gene20891 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0293.g063444 No alias EC_3.2 glycosylase & original description: CDS=788-2134 0.03 OrthoFinder output from all 47 species
Cba_g12302 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16676 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g24405 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G023500.1 Ceric.09G023500 EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.38G048100.1 Ceric.38G048100 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g02823 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29621 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22323 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04582 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07520 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08388 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10056 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10127 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13296 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14122 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15261 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g17286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019516001 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
GSVIVT01028057001 No alias Probable polygalacturonase OS=Vitis vinifera 0.01 OrthoFinder output from all 47 species
Gb_17217 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Gb_39001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os01g43160.1 LOC_Os01g43160 Probable polygalacturonase OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
LOC_Os02g15690.1 LOC_Os02g15690 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os03g61800.2 LOC_Os03g61800 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os05g50960.1 LOC_Os05g50960 Probable polygalacturonase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
LOC_Os09g26800.1 LOC_Os09g26800 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36810.1 LOC_Os12g36810 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Len_g07468 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59151 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430135g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
MA_104339g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
MA_11025g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
MA_88519g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
MA_9467735g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Msp_g08216 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31187 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06175 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15019 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10961 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61919 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g049980.3.1 Solyc05g049980 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Solyc08g081480.3.1 Solyc08g081480 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Solyc09g075460.3.1 Solyc09g075460 Probable polygalacturonase OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
Spa_g14594 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39268 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39269 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24209 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e024829_P001 Zm00001e024829 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Zm00001e026646_P002 Zm00001e026646 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029809_P002 Zm00001e029809 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 91 436
No external refs found!