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  5. Ore_g42309

Ore_g42309 (HRE2)


Aliases : HRE2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g42309

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00132820 RAP2.11,... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
AMTR_s00089p00102760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00107p00095070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AT1G01250 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g045252 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g111965 ATERF3, ERF3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g31370 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08964 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10439 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g38509 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14409 No alias subgroup ERF-I transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g05459 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21431 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aop_g38301 HRE2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03857.t1 Aspi01Gene03857 subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15146.t1 Aspi01Gene15146 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24401.t1 DEAR2, Aspi01Gene24401 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58502.t1 Aspi01Gene58502 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g03083 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g13066 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14470 ERF110 subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33212 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dac_g40468 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10630 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Dcu_g11868 SHN3 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
GSVIVT01002195001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01006277001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01017315001 WIN1, SHN1 Cell wall.cutin and suberin.biosynthesis... 0.04 OrthoFinder output from all 47 species
GSVIVT01017542001 No alias Ethylene-responsive transcription factor ERF084... 0.02 OrthoFinder output from all 47 species
GSVIVT01018272001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01027770001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01032983001 Rap2.6L RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01033793001 HRD RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01035852001 SHN3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Gb_03645 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Gb_03783 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_07476 ERF-6-6, ERF6, ATERF6 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_08035 tny transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Gb_16683 ERF110 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_19221 DEAR3 Ethylene-responsive transcription factor ERF008... 0.02 OrthoFinder output from all 47 species
Gb_23321 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_24328 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_24891 RAP2.12 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_26856 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_26857 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26858 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26863 tny transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_34286 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_36618 DREB26 Ethylene-responsive transcription factor ERF012... 0.02 OrthoFinder output from all 47 species
Gb_36619 DEAR3 Ethylene-responsive transcription factor ERF008... 0.03 OrthoFinder output from all 47 species
Gb_37188 No alias transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Gb_41836 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g10370.1 tny, LOC_Os01g10370 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g10760.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
LOC_Os02g13710.1 TINY2, LOC_Os02g13710 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41760.1 ATERF12, ERF12,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g40150.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Len_g13558 DEAR3 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.01 OrthoFinder output from all 47 species
MA_15251g0010 tny transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_15496g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.02 OrthoFinder output from all 47 species
MA_214063g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_225124g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_33689g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_411387g0010 ERF2, ATERF2, ATERF-2 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_436575g0010 TINY2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_500288g0010 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_54341g0010 WIN1, SHN1 transcription factor (ERF). SHN-type cutin and suberin... 0.04 OrthoFinder output from all 47 species
MA_647924g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_7960347g0010 TMO3, CRF2 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_900190g0010 No alias transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Mp5g01050.1 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Msp_g05560 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32986 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46475 RRTF1 subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c10_17870V3.1 Pp3c10_17870 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c5_11150V3.1 Pp3c5_11150 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010633 No alias not classified & original description: CDS=1-1278 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011575 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-717 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013122 ORA47 not classified & original description: CDS=1-783 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016650 ERF38, ATERF38 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc02g077360.1.1 Solyc02g077360 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g116610.3.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Solyc03g118190.4.1 Solyc03g118190 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc04g080910.1.1 Solyc04g080910 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Solyc05g050790.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc05g050830.3.1 Solyc05g050830 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Solyc06g065820.3.1 Solyc06g065820 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc06g066540.1.1 TINY2, Solyc06g066540 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc09g091950.1.1 Solyc09g091950 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc11g011750.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Tin_g14637 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31282 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e014008_P002 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Zm00001e018522_P001 CBF4, DREB1D,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e022016_P001 Zm00001e022016 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e025840_P001 DREB2A, DREB2,... transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Zm00001e030585_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.02 OrthoFinder output from all 47 species
Zm00001e036201_P001 Zm00001e036201 Ethylene-responsive transcription factor ERF014... 0.02 OrthoFinder output from all 47 species
Zm00001e037404_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 145 194
No external refs found!