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  5. Ore_g41838

Ore_g41838


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g41838

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00061490 RHC1A,... Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Adi_g014381 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g017038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g46210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01998 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aob_g05181 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g11430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33056.t1 Aspi01Gene33056 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G061800.1 Ceric.02G061800 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.05 OrthoFinder output from all 47 species
Ceric.16G066200.1 Ceric.16G066200 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.32G049400.1 Ceric.32G049400 not classified & original description: pacid=50598110... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000880.42 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dac_g04251 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g13726 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g03848 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dde_g16758 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g51480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01134 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g01160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02398 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g11152 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ehy_g14500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27311 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g30061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_22124 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g44240.1 LOC_Os01g44240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g22017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05536 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g11310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_79051g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 OrthoFinder output from all 47 species
Nbi_g11583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g01325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24146 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g52386 No alias E3 ubiquitin ligase *(SNIPER) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g12414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008140 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008472 No alias not classified & original description: CDS=606-2018 0.03 OrthoFinder output from all 47 species
Sam_g05103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14659 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e038273_P001 Zm00001e038273 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 55 97
No external refs found!