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  5. Ore_g41741

Ore_g41741


Description : DNA polymerase eta *(POLH) & original description: none


Gene families : OG0007928 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007928_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g41741
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Adi_g081447 POLH DNA polymerase eta *(POLH) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02435 No alias DNA polymerase eta *(POLH) & original description: none 0.02 OrthoFinder output from all 47 species
Cre03.g148050 POLH DNA damage response.DNA repair polymerase activities.DNA... 0.01 OrthoFinder output from all 47 species
Dcu_g43877 No alias DNA polymerase eta *(POLH) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15685 No alias DNA polymerase eta *(POLH) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18551 POLH DNA polymerase eta *(POLH) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR041298 UBZ3 566 594
IPR001126 UmuC 13 197
IPR017961 DNA_pol_Y-fam_little_finger 285 403
No external refs found!