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  5. Ore_g41169

Ore_g41169


Description : rhamnosyltransferase *(RRT) & original description: none


Gene families : OG0001379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g41169
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00267640 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT5G15740 No alias O-fucosyltransferase family protein 0.02 OrthoFinder output from all 47 species
Ala_g04451 No alias rhamnosyltransferase *(RRT) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g15521 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15522 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16331 No alias rhamnosyltransferase *(RRT) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04445 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07312 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G096200.1 Ceric.09G096200 rhamnosyltransferase *(RRT) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g16375 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06359 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06844 No alias rhamnosyltransferase *(RRT) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g15549 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008161001 No alias O-fucosyltransferase 34 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_12518 No alias rhamnosyltransferase 0.03 OrthoFinder output from all 47 species
LOC_Os01g07410.1 LOC_Os01g07410 rhamnosyltransferase 0.03 OrthoFinder output from all 47 species
LOC_Os06g17390.1 LOC_Os06g17390 rhamnosyltransferase 0.08 OrthoFinder output from all 47 species
Len_g11916 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09258 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40298 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11373 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09098 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11742 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16164 No alias rhamnosyltransferase *(RRT) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g02274 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020520 No alias rhamnosyltransferase *(RRT) & original description: CDS=407-2056 0.03 OrthoFinder output from all 47 species
Smo110454 No alias O-fucosyltransferase 21 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Spa_g06711 No alias rhamnosyltransferase *(RRT) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g48097 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11044 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16519 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 124 444
No external refs found!