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  5. Ore_g40937

Ore_g40937 (CMT2)


Aliases : CMT2

Description : DNA chromomethylase *(CMT) & original description: none


Gene families : OG0002093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g40937

Target Alias Description ECC score Gene Family Method Actions
Als_g09491 CMT3 DNA chromomethylase *(CMT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19238.t1 Aspi01Gene19238 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03405 CMT2 DNA chromomethylase *(CMT) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g01570.1 CMT3, LOC_Os10g01570 DNA chromomethylase (CMT) 0.02 OrthoFinder output from all 47 species
Mp6g08650.1 CMT3 DNA chromomethylase (CMT) 0.03 OrthoFinder output from all 47 species
Nbi_g39436 CMT3 DNA chromomethylase *(CMT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10202 CMT3 DNA chromomethylase *(CMT) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR023780 Chromo_domain 468 522
IPR001525 C5_MeTfrase 535 895
IPR001025 BAH_dom 177 295
No external refs found!