1. Home
  2. Species
  3. Angiopteris evecta
  4. Sequence
  5. Aev_g18266

Aev_g18266


Description : component *(Pcf11) of Cleavage Factor II (CF-IIm) complex & original description: none


Gene families : OG0001185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001185_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g18266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00031880 PCFS4,... RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.03 OrthoFinder output from all 47 species
Adi_g060938 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Ala_g10884 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Ala_g11854 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Als_g23728 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Als_g60779 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Aob_g04503 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53580.t1 PCFS4, Aspi01Gene53580 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046372 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Ceric.39G024000.1 Ceric.39G024000 not classified & original description: pacid=50583322... 0.04 OrthoFinder output from all 47 species
Dac_g31003 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Dcu_g09800 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.07 OrthoFinder output from all 47 species
Ehy_g18944 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
GSVIVT01012646001 PCFS4 RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.03 OrthoFinder output from all 47 species
GSVIVT01033783001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39270.1 LOC_Os09g39270 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species
Lfl_g16594 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
MA_10040687g0010 PCFS4 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
MA_10433250g0020 PCFS4 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
MA_132868g0010 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.05 OrthoFinder output from all 47 species
Msp_g36985 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Nbi_g01471 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Pir_g02318 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Ppi_g08449 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Ppi_g57483 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Solyc09g009120.4.1 Solyc09g009120 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
Solyc10g083590.2.1 Solyc10g083590 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
Spa_g05766 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Spa_g48755 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.05 OrthoFinder output from all 47 species
Zm00001e009485_P001 Zm00001e009485 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
Zm00001e021648_P002 PCFS4, Zm00001e021648 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.04 OrthoFinder output from all 47 species
Zm00001e033620_P001 Zm00001e033620 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.05 OrthoFinder output from all 47 species
Zm00001e039948_P002 PCFS4, Zm00001e039948 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR006569 CID_dom 288 388
No external refs found!