Ore_g38342


Description : not classified & original description: none


Gene families : OG0001679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001679_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g38342
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00196350 evm_27.TU.AmTr_v1... Putative ripening-related protein 2 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
AMTR_s00002p00197000 evm_27.TU.AmTr_v1... Putative ripening-related protein 1 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
AMTR_s00005p00207640 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
AMTR_s00005p00208720 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.06 OrthoFinder output from all 47 species
AMTR_s00005p00210680 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Als_g27137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22043.t1 Aspi01Gene22043 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50260.t1 Aspi01Gene50260 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G075300.1 Ceric.32G075300 not classified & original description: pacid=50597616... 0.03 OrthoFinder output from all 47 species
Dcu_g14173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026884001 No alias Putative ripening-related protein 5 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os02g42450.1 LOC_Os02g42450 Putative ripening-related protein 2 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os04g29550.1 LOC_Os04g29550 Putative ripening-related protein 1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os06g02640.1 LOC_Os06g02640 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g34760.1 LOC_Os10g34760 Putative ripening-related protein 6 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
LOC_Os10g34770.1 LOC_Os10g34770 Putative ripening-related protein 7 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os10g34840.1 LOC_Os10g34840 Ripening-related protein 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Len_g44254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g49301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35967 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g36438 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g36946 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g04962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g33994 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g33995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g34399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo430105 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo99218 No alias Ripening-related protein grip22 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Solyc11g069880.1.1 Solyc11g069880 Kiwellin OS=Actinidia deliciosa (sp|p84527|kiwel_actde : 219.0) 0.03 OrthoFinder output from all 47 species
Spa_g32195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!