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Description : PHD finger transcription factor & original description: none
Gene families : OG0003668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003668_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G12400 | No alias | DNA binding;zinc ion binding;DNA binding | 0.04 | OrthoFinder output from all 47 species | |
| AT5G35210 | No alias | metalloendopeptidases;zinc ion binding;DNA binding | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g023154 | No alias | PHD finger transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g107345 | No alias | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g10447 | No alias | PHD finger transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g07161 | No alias | PHD finger transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g29357 | No alias | PHD finger transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene36310.t1 | Aspi01Gene36310 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene36311.t1 | Aspi01Gene36311 | PHD finger transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene36312.t1 | Aspi01Gene36312 | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75389 | No alias | PHD finger transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G051900.1 | Ceric.29G051900 | PHD finger transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cre05.g247000 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04154 | No alias | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g09845 | No alias | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08699 | No alias | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17420 | No alias | PHD finger transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g31521 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031411001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037231001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g05130.1 | LOC_Os11g05130 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05757 | No alias | PHD finger transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g03291 | No alias | PHD finger transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo441144 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g065160.3.1 | Solyc11g065160 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g066780.3.1 | Solyc11g066780 | PHD finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g25847 | No alias | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003909 | DNA ligase activity | IEP | HCCA |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006476 | protein deacetylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016575 | histone deacetylation | IEP | HCCA |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0035601 | protein deacylation | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0098732 | macromolecule deacylation | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |