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Description : not classified & original description: none
Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g37913 | |
| Cluster | HCCA: Cluster_128 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G60610 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G12920 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G17680 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g006506 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g039739 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g082585 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g08224 | SBP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39093 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12144 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g56929 | SBP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01947 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g24464 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g32257 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36114 | SBP1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene62396.t1 | SBP1, Aspi01Gene62396 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0329.g065317 | RING | not classified & original description: CDS=1-1395 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g77781 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g06847 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03553 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05698 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020407001 | No alias | Probable BOI-related E3 ubiquitin-protein ligase 3... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g46570.1 | LOC_Os03g46570 | Probable BOI-related E3 ubiquitin-protein ligase 3... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g32980.1 | LOC_Os04g32980 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g34080.1 | LOC_Os11g34080 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g21964 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00907 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g18402 | SBP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g24338 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0087.g018517 | No alias | not classified & original description: CDS=1110-2285 | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g00686 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g34647 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013554_P001 | Zm00001e013554 | Probable BOI-related E3 ubiquitin-protein ligase 2... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e033245_P001 | Zm00001e033245 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |