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  5. Ore_g37468

Ore_g37468


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0002976 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002976_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g37468

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00265300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.04 OrthoFinder output from all 47 species
AT3G10030 No alias aspartate/glutamate/uridylate kinase family protein 0.03 OrthoFinder output from all 47 species
Cba_g06521 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G006300.1 Ceric.23G006300 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g01272 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26996 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52326 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g008850.3.1 Solyc09g008850 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Zm00001e008247_P005 Zm00001e008247 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 145 236
IPR001048 Asp/Glu/Uridylate_kinase 289 517
No external refs found!