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Description : not classified & original description: none
Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g37256 | |
| Cluster | HCCA: Cluster_127 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G12470 | No alias | Protein of unknown function (DUF3411) | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g02433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g02541 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g27723 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23936 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g34117 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g01529 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12949 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene06534.t1 | Aspi01Gene06534 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g03217 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.22G078500.1 | Ceric.22G078500 | not classified & original description: pacid=50614469... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02819 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g11697 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g61120.1 | LOC_Os01g61120 | Protein RETICULATA-RELATED 6, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g11651 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g35960 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| MA_10429062g0010 | No alias | Protein RETICULATA-RELATED 5, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g12840.1 | No alias | Protein RETICULATA-RELATED 6, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15648 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g02954 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g20049 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g38821 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g08153 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g57518 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0039.g012218 | No alias | not classified & original description: CDS=101-1345 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0041.g012586 | No alias | not classified & original description: CDS=235-2685 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g087750.4.1 | Solyc01g087750 | Protein RETICULATA-RELATED 4, chloroplastic... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e018574_P001 | Zm00001e018574 | Protein RETICULATA-RELATED 4, chloroplastic... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
| BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
| MF | GO:0010242 | oxygen evolving activity | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
| BP | GO:0042549 | photosystem II stabilization | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021825 | RETICULATA-related | 172 | 349 |
| No external refs found! |