1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g37217

Ore_g37217 (SDG2, ATXR3)


Aliases : SDG2, ATXR3

Description : not classified & original description: none


Gene families : OG0002791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002791_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g37217

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00149000 SDG2, ATXR3,... Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Adi_g039581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116452 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Aev_g14143 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Ala_g13000 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Aob_g28999 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Aop_g29882 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Ceric.18G017200.1 SDG2, ATXR3,... class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Dac_g23370 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07181 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Ehy_g05119 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01030649001 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
LOC_Os08g08210.1 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.02 OrthoFinder output from all 47 species
Len_g14756 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
MA_102811g0010 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species
Mp2g06500.1 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species
Ppi_g02428 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008756 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Sam_g17455 No alias class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Smo432361 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Smo447947 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Solyc07g052940.4.1 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.06 OrthoFinder output from all 47 species
Spa_g50988 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Tin_g09792 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e021659_P001 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.04 OrthoFinder output from all 47 species
Zm00001e039942_P003 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!