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  5. Ore_g37140

Ore_g37140 (RST1)


Aliases : RST1

Description : regulatory cofactor *(RST1) of exosome complex & original description: none


Gene families : OG0004554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004554_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g37140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00082p00059940 RST1,... Protein RST1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G27670 RST1 ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Cba_g21767 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g20670 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Dde_g22672 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g15958 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01032418001 RST1 Protein RST1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_07737 RST1 regulatory cofactor (RST1) of exosome complex 0.03 OrthoFinder output from all 47 species
LOC_Os01g07490.1 RST1, LOC_Os01g07490 regulatory cofactor (RST1) of exosome complex 0.04 OrthoFinder output from all 47 species
Lfl_g09718 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
MA_182339g0020 RNR1,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_43690g0010 RST1 Protein RST1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g30835 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012444 No alias regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Sam_g11649 No alias regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Smo404660 RST1 Protein RST1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g086500.3.1 RST1, Solyc02g086500 regulatory cofactor (RST1) of exosome complex 0.02 OrthoFinder output from all 47 species
Spa_g09091 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Tin_g08466 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e016783_P003 RST1, Zm00001e016783 regulatory cofactor (RST1) of exosome complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022542 FOCAD/RST1_DUF3730 527 739
No external refs found!