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  5. Ore_g37064

Ore_g37064 (RGL1, RGL)


Aliases : RGL1, RGL

Description : GRAS-type transcription factor *(RAD1) & original description: none


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g37064
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00207840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
AT1G66350 RGL1, RGL RGA-like 1 0.06 OrthoFinder output from all 47 species
AT5G17490 RGL3 RGA-like protein 3 0.04 OrthoFinder output from all 47 species
Aob_g19932 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g22059 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029812 RGL2 GRAS-type transcription factor & original description: CDS=1-2046 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036465 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-2091 0.03 OrthoFinder output from all 47 species
Dac_g38769 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g50393 RGL2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g49990.1 RGA2, GAI, LOC_Os03g49990 DELLA-type gibberellin signal transducer. transcription... 0.04 OrthoFinder output from all 47 species
LOC_Os05g49930.1 RGA2, GAI, LOC_Os05g49930 DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os11g31100.1 RGL1, RGL, LOC_Os11g31100 DELLA-type gibberellin signal transducer. transcription... 0.05 OrthoFinder output from all 47 species
Len_g48752 RGL1, RGL GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04248 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20507 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03910 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Pir_g44392 RGA2, GAI transcription factor *(DELLA) & original description: none 0.04 OrthoFinder output from all 47 species
Smo139506 RGA2, GAI RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Tin_g40110 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e012213_P001 RGA2, GAI, Zm00001e012213 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 222 583
No external refs found!