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  5. Ore_g36231

Ore_g36231


Description : not classified & original description: none


Gene families : OG0004236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g36231

Target Alias Description ECC score Gene Family Method Actions
Aop_g21221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64106.t1 Aspi01Gene64106 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.28G050700.1 Ceric.28G050700 not classified & original description: pacid=50570551... 0.03 OrthoFinder output from all 47 species
Dac_g32150 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_19265 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os03g01830.1 LOC_Os03g01830 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Len_g02379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g11020.1 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g50608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005945 No alias not classified & original description: CDS=228-2279 0.02 OrthoFinder output from all 47 species
Sam_g16562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g045180.3.1 Solyc11g045180 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e039095_P002 Zm00001e039095 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 330 446
IPR011545 DEAD/DEAH_box_helicase_dom 108 282
No external refs found!