1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g36065

Ore_g36065 (ATSRL1)


Aliases : ATSRL1

Description : not classified & original description: none


Gene families : OG0003543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003543_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g36065

Target Alias Description ECC score Gene Family Method Actions
AT5G37370 ATSRL1 PRP38 family protein 0.02 OrthoFinder output from all 47 species
Als_g27184 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026312001 ATSRL1 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g04762 ATSRL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20398 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025788 ATSRL1 not classified & original description: CDS=295-1590 0.02 OrthoFinder output from all 47 species
Sam_g38592 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g014560.4.1 ATSRL1, Solyc04g014560 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR005037 PRP38 11 164
IPR024767 PRP38_C 188 273
No external refs found!