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  5. Ore_g35990

Ore_g35990 (HY3, OOP1, PHYB)


Aliases : HY3, OOP1, PHYB

Description : temperature sensor protein *(PHY-B) & original description: none


Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g35990

Target Alias Description ECC score Gene Family Method Actions
Adi_g013003 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16495 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33149 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02397 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16813 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18615 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12773 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor *(PHY) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22401 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022080.1 PHYD Phytochrome B OS=Sorghum bicolor 0.01 OrthoFinder output from all 47 species
Ehy_g07141 HY3, OOP1, PHYB phytochrome photoreceptor *(PHY) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021381001 PHYE External stimuli response.temperature.temperature... 0.04 OrthoFinder output from all 47 species
LOC_Os03g19590.1 HY3, OOP1, PHYB,... phytochrome photoreceptor (PHY). temperature sensor... 0.02 OrthoFinder output from all 47 species
Msp_g14224 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30879 HY3, OOP1, PHYB phytochrome photoreceptor *(PHY) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g10642 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14459 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor *(PHY) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001462_P001 HY3, OOP1, PHYB,... phytochrome photoreceptor (PHY). temperature sensor... 0.03 OrthoFinder output from all 47 species
Zm00001e005702_P001 PHYC, Zm00001e005702 phytochrome photoreceptor (PHY) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP HCCA
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013767 PAS_fold 747 869
IPR013767 PAS_fold 616 731
IPR003594 HATPase_C 1003 1112
IPR003018 GAF 217 398
IPR013515 Phytochrome_cen-reg 411 584
IPR013654 PAS_2 68 183
IPR003661 HisK_dim/P 893 954
No external refs found!