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Aliases : ATPRP40C, PRP40C
Description : pre-mRNA-processing protein *(PRP40C) & original description: none
Gene families : OG0006310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006310_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00102340 | ATPRP40C,... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00103360 | ATPRP40C,... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011526 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g116721 | ATPRP40C, PRP40C | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g19827 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06832 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g08237 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0066.g036110 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g01325 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G036100.1 | ATPRP40C,... | pre-mRNA-processing protein *(PRP40C) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Cre09.g393551 | ATPRP40C, PRP40C | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g14070 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g19140 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010209001 | ATPRP40C, PRP40C | RNA processing.RNA splicing.U2-type-intron-specific... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g34380.1 | ATPRP40C,... | pre-mRNA-processing protein (PRP40C) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g09020 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02397 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10430753g0010 | ATPRP40C, PRP40C | pre-mRNA-processing protein (PRP40C) | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g09830.1 | ATPRP40C, PRP40C | pre-mRNA-processing protein (PRP40C) | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11410 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g32127 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10525 | No alias | pre-mRNA-processing protein *(PRP40C) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo439648 | ATPRP40C, PRP40C | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g008700.3.1 | ATPRP40C,... | pre-mRNA-processing protein (PRP40C) | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g30945 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06690 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012643_P002 | ATPRP40C,... | pre-mRNA-processing protein (PRP40C) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| No external refs found! |