Ore_g35087 (NFA03, NFA3, NAP1;3)

Aliases : NFA03, NFA3, NAP1;3

Description : histone chaperone *(NAP) & original description: none

Gene families : OG0000784 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000784_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g35087
Cluster	HCCA: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
AT4G26110	ATNAP1;1, NAP1;1	nucleosome assembly protein1;1	0.03	OrthoFinder output from all 47 species
Adi_g078523	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os06g05660.1	NFA02, NFA2,...	histone chaperone (NAP)	0.02	OrthoFinder output from all 47 species
Len_g14932	ATNAP1;1, NAP1;1	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
MA_457513g0010	NFA03, NFA3, NAP1;3	histone chaperone (NAP)	0.02	OrthoFinder output from all 47 species
Spa_g46324	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e036497_P001	NFA02, NFA2,...	histone chaperone (NAP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006302	double-strand break repair	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002164	NAP_family	58	304

External Links

No external refs found!