Aliases : PUB13, ATPUB13
Description : E3 ubiquitin ligase & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g33829 | |
Cluster | HCCA: Cluster_137 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00072p00171260 | PUB14, ATPUB14,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AT4G21350 | PUB8, B80 | plant U-box 8 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g023452 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g057743 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Adi_g057744 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g03944 | PUB12, AtPUB12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g05159 | PUB12, AtPUB12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0497.g073607 | PUB12, AtPUB12 | not classified & original description: CDS=1-549 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.26G012900.1 | Ceric.26G012900 | not classified & original description: pacid=50598948... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.34G048100.1 | Ceric.34G048100 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g04784 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g02771 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g04978 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g16824.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g04470.1 | PUB8, B80, LOC_Os08g04470 | U-box domain-containing protein 8 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_84321g0010 | PUB13, ATPUB13 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0029.g010151 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: CDS=1-1236 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0077.g017664 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: CDS=217-2226 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0109.g020568 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: CDS=347-2224 | 0.02 | OrthoFinder output from all 47 species | |
Solyc11g008390.2.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g11287 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e002954_P001 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | HCCA |
MF | GO:0003980 | UDP-glucose:glycoprotein glucosyltransferase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
BP | GO:0006486 | protein glycosylation | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0070085 | glycosylation | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
No external refs found! |