Pp3c12_17690V3.1


Description : Small nuclear ribonucleoprotein family protein


Gene families : OG_01_0003631 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003631_tree ,
OG_02_0003618 (LandPlants) Phylogenetic Tree(s): OG_02_0003618_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_17690V3.1
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00221440 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.07 Archaeplastida
AT2G47640 No alias Small nuclear ribonucleoprotein family protein 0.05 Archaeplastida
AT3G62840 No alias Small nuclear ribonucleoprotein family protein 0.04 Archaeplastida
Cpa|evm.model.tig00021133.4 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.06 Archaeplastida
Cre10.g453450 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.09 Archaeplastida
GSVIVT01011627001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 Archaeplastida
GSVIVT01028015001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 Archaeplastida
LOC_Os05g24970.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.14 Archaeplastida
Mp3g10740.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.07 Archaeplastida
Pp3c3_26020V3.1 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
Solyc09g075130.3.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.08 Archaeplastida
Zm00001e007570_P002 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.07 Archaeplastida
Zm00001e041242_P002 No alias No annotation 0.07 Archaeplastida
AMTR_s00057p00221440 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.06 LandPlants
AT2G47640 No alias Small nuclear ribonucleoprotein family protein 0.05 LandPlants
AT3G62840 No alias Small nuclear ribonucleoprotein family protein 0.04 LandPlants
GSVIVT01011627001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 LandPlants
GSVIVT01028015001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 LandPlants
LOC_Os05g24970.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.12 LandPlants
Mp3g10740.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.07 LandPlants
Pp3c3_26020V3.1 No alias Small nuclear ribonucleoprotein family protein 0.02 LandPlants
Solyc09g075130.3.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.06 LandPlants
Zm00001e007570_P002 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.07 LandPlants
Zm00001e041242_P002 No alias No annotation 0.06 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 29 103
No external refs found!