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  5. Ore_g33380

Ore_g33380 (ADC2, SPE2, ATADC2)


Aliases : ADC2, SPE2, ATADC2

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0001452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33380
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00026140 ADC2, SPE2,... Polyamine... 0.04 OrthoFinder output from all 47 species
AT2G16500 ADC1, ARGDC, ARGDC1, SPE1 arginine decarboxylase 1 0.03 OrthoFinder output from all 47 species
AT4G34710 ADC2, SPE2, ATADC2 arginine decarboxylase 2 0.02 OrthoFinder output from all 47 species
Adi_g024366 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035036 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21968 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13998 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15163.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57606.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene64047.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z147000.1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g08893 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40129 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g04009 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03949 ADC1, ARGDC, ARGDC1, SPE1 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g01690.3 ADC1, ARGDC,... arginine decarboxylase 0.03 OrthoFinder output from all 47 species
LOC_Os06g04070.1 ADC2, SPE2,... arginine decarboxylase 0.03 OrthoFinder output from all 47 species
Len_g12872 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38761 ADC1, ARGDC, ARGDC1, SPE1 arginine decarboxylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01193 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26829 ADC1, ARGDC, ARGDC1, SPE1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26830 ADC1, ARGDC, ARGDC1, SPE1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06691 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58596 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25136 ADC1, ARGDC, ARGDC1, SPE1 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17386 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04999 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022644 De-COase2_N 122 343
No external refs found!