Ore_g33373


Description : component *(uL30) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001142_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33373

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00107780 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00187310 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s00086p00164400 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
AT2G01250 No alias Ribosomal protein L30/L7 family protein 0.06 OrthoFinder output from all 47 species
Aev_g26611 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g00722 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g30462 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0129.g048841 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0870.g090589 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.11G041100.1 Ceric.11G041100 component *(uL30) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.34G033800.1 Ceric.34G033800 component *(uL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.34G033900.1 Ceric.34G033900 not classified & original description: pacid=50622765... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020909.42 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Cre12.g537800 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Dac_g10886 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g00598 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g32244 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g33812 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01029288001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01029655001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Gb_20650 No alias component RPL7 of LSU proteome component 0.06 OrthoFinder output from all 47 species
LOC_Os04g51630.1 LOC_Os04g51630 component RPL7 of LSU proteome component 0.05 OrthoFinder output from all 47 species
LOC_Os08g13690.1 LOC_Os08g13690 component RPL7 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os08g42920.1 LOC_Os08g42920 component RPL7 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_109845g0010 No alias component RPL7 of LSU proteome component 0.07 OrthoFinder output from all 47 species
MA_47548g0010 No alias component RPL7 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp3g13040.1 No alias component RPL7 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Msp_g04692 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c1_39470V3.1 Pp3c1_39470 Ribosomal protein L30/L7 family protein 0.04 OrthoFinder output from all 47 species
Pp3c2_1610V3.1 Pp3c2_1610 Ribosomal protein L30/L7 family protein 0.01 OrthoFinder output from all 47 species
Pp3c2_5820V3.1 Pp3c2_5820 Ribosomal protein L30/L7 family protein 0.03 OrthoFinder output from all 47 species
Ppi_g20280 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015032 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g06365 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g10126 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g10127 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g13945 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g17394 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g27105 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g31082 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo103994 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc06g068400.3.1 Solyc06g068400 component RPL7 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Solyc08g075090.4.1 Solyc08g075090 transcription factor (bHLH). component RPL7 of LSU... 0.03 OrthoFinder output from all 47 species
Tin_g21600 No alias component *(uL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e003731_P002 Zm00001e003731 component RPL7 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e007015_P002 Zm00001e007015 component RPL7 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Zm00001e022294_P001 Zm00001e022294 component RPL7 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Zm00001e040072_P002 Zm00001e040072 component RPL7 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e041593_P001 Zm00001e041593 component RPL7 of LSU proteome component 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR016082 Ribosomal_L30_ferredoxin-like 89 139
IPR012988 Ribosomal_L30_N 13 84
No external refs found!