1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g33238

Ore_g33238 (MYB3R-1, ATMYB3R1,...)


Aliases : MYB3R-1, ATMYB3R1, PC-MYB1, MYB3R1, ATMYB3R-1

Description : R1R2R3-MYB transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33238
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 AtMYB98, MYB98,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00137930 MYB54, ATMYB54,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00096p00076220 AtMYB98, MYB98,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.03 OrthoFinder output from all 47 species
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.04 OrthoFinder output from all 47 species
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.04 OrthoFinder output from all 47 species
AT4G18770 AtMYB98, MYB98 myb domain protein 98 0.02 OrthoFinder output from all 47 species
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.02 OrthoFinder output from all 47 species
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.03 OrthoFinder output from all 47 species
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.03 OrthoFinder output from all 47 species
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 OrthoFinder output from all 47 species
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.03 OrthoFinder output from all 47 species
Adi_g059961 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aev_g01523 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ala_g27236 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aob_g23891 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38260 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32034.t1 AtMYB124,... MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66011.t1 MYB77, Aspi01Gene66011 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69493.t1 LOF2, MYB105,... MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0105.g044929 AtMYB117, LOF1, MYB117 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Cba_g03902 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ceric.03G075000.1 MYB56, AtMYB56,... MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ceric.23G045000.1 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.2 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Dac_g04675 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02040 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dde_g28841 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ehy_g10489 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01000219001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01020038001 MYB88, AtMYB88 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_01889 BW52, ATMYB52, MYB52 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Gb_39484 MYB77 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g16810.1 LOF2, MYB105,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g74590.1 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g43090.1 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os11g10130.1 BW52, ATMYB52,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Lfl_g28242 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
MA_120049g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_373893g0010 AtMYB124, MYB124, FLP no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g17210.1 ATMYB119, MYB119 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp5g14610.1 MYB77 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Msp_g06500 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Nbi_g24734 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Pir_g37889 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pnu_g08134 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12037 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pp3c18_340V3.1 LOF2, MYB105,... myb domain protein 105 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002693 MYB56, AtMYB56 not classified & original description: CDS=2737-4053 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019382 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021926 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0226.g026344 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sam_g12139 No alias MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Smo6091 AtMYB117, LOF1, MYB117 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Solyc02g092930.1.1 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc03g098270.1.1 LOF2, MYB105,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g005710.3.1 AtMYB124,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc06g076840.3.1 ATMYB119,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e013910_P001 MYB77, Zm00001e013910 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 61 107
No external refs found!