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  5. Ore_g33228

Ore_g33228


Description : component *(TRM732) of TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex & original description: none


Gene families : OG0006426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33228

Target Alias Description ECC score Gene Family Method Actions
AT3G55160 No alias unknown protein; EXPRESSED IN: 11 plant structures;... 0.07 OrthoFinder output from all 47 species
Aev_g20224 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.02 OrthoFinder output from all 47 species
Cba_g74571 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
Ceric.12G034300.1 Ceric.12G034300 component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
Cre15.g642050 No alias RNA processing.RNA modification.rRNA/tRNA... 0.01 OrthoFinder output from all 47 species
Dcu_g13115 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
Dde_g12713 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
Ehy_g12389 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.08 OrthoFinder output from all 47 species
GSVIVT01011388001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.07 OrthoFinder output from all 47 species
Gb_02094 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.06 OrthoFinder output from all 47 species
Gb_02097 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.04 OrthoFinder output from all 47 species
LOC_Os08g07290.1 LOC_Os08g07290 component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
Len_g48843 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.02 OrthoFinder output from all 47 species
MA_177186g0010 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.05 OrthoFinder output from all 47 species
MA_41436g0010 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.02 OrthoFinder output from all 47 species
Sam_g18072 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.02 OrthoFinder output from all 47 species
Smo74297 No alias RNA processing.RNA modification.rRNA/tRNA... 0.07 OrthoFinder output from all 47 species
Solyc03g062650.3.1 Solyc03g062650 component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.06 OrthoFinder output from all 47 species
Zm00001e040139_P001 Zm00001e040139 component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019442 THADA/TRM732_DUF2428 1173 1502
No external refs found!