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  5. Ore_g32787

Ore_g32787 (RAD51, ATRAD51)


Aliases : RAD51, ATRAD51

Description : component *(RAD51) of BRCC regulatory deubiquination complex & original description: none


Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g32787
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Ala_g23150 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.07 OrthoFinder output from all 47 species
Als_g52823 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.09 OrthoFinder output from all 47 species
Aspi01Gene65488.t1 RAD51, ATRAD51,... component *(RAD51) of BRCC regulatory deubiquination... 0.07 OrthoFinder output from all 47 species
Azfi_s0037.g026051 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.03 OrthoFinder output from all 47 species
Ceric.01G082000.1 RAD51, ATRAD51,... component *(RAD51) of BRCC regulatory deubiquination... 0.04 OrthoFinder output from all 47 species
Ceric.17G014900.1 XRCC3, ATXRCC3,... component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000870.37 RAD51, ATRAD51 DNA damage response.BRCC DNA-damage response... 0.01 OrthoFinder output from all 47 species
Dac_g00622 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.06 OrthoFinder output from all 47 species
Dcu_g00814 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.04 OrthoFinder output from all 47 species
Len_g59568 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.03 OrthoFinder output from all 47 species
Lfl_g17235 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.08 OrthoFinder output from all 47 species
MA_93267g0010 RAD51, ATRAD51 DNA repair protein RAD51 homolog 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp7g15410.1 XRCC3, ATXRCC3 component XRCC3 of RAD51c-XRCC3 accessory DSB repair heterodimer 0.02 OrthoFinder output from all 47 species
Msp_g01981 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.06 OrthoFinder output from all 47 species
Nbi_g04179 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.07 OrthoFinder output from all 47 species
Ppi_g02833 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000652 ARLIM15, DMC1, ATDMC1 not classified & original description: CDS=1-1248 0.03 OrthoFinder output from all 47 species
Spa_g38367 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.03 OrthoFinder output from all 47 species
Tin_g05894 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 85 337
No external refs found!