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  5. Ore_g32193

Ore_g32193


Description : not classified & original description: none


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g32193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00144160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Adi_g018593 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g074565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01754 No alias regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Aob_g01806 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aob_g02256 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Aob_g04427 No alias regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Aop_g10028 No alias A1-class (Pepsin) protease & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14447 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aop_g20459 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G007100.1 Ceric.10G007100 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G050600.1 Ceric.19G050600 not classified & original description: pacid=50576234... 0.04 OrthoFinder output from all 47 species
Ceric.31G012100.1 Ceric.31G012100 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.38G012000.1 Ceric.38G012000 not classified & original description: pacid=50579791... 0.06 OrthoFinder output from all 47 species
Cre11.g476200 No alias No description available 0.05 OrthoFinder output from all 47 species
Dcu_g04048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17295 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dde_g05290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10013 ZFWD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16999 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Lfl_g40942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g23720.1 No alias C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Msp_g06179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06927 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02248 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g08513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05890 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000115 No alias platform ATPase CDC48 & original description: CDS=3649-4851 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0199.g025558 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0240.g026606 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g09323 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g16004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24728 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Sam_g26314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g072720.3.1 Solyc06g072720 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g28121 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11119 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Tin_g15337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040205_P001 Zm00001e040205 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 176 200
IPR041367 Znf-CCCH_4 247 268
No external refs found!