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  5. Ore_g31143

Ore_g31143 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g31143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00012240 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00072p00119650 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00215p00017850 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s01072p00000950 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s02052p00000390 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aob_g06733 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026266 ATWBC11, ABCG11,... not classified & original description: CDS=1-1830 0.02 OrthoFinder output from all 47 species
Cba_g15273 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18232 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28458 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Gb_05256 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_18495 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_28881 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os10g35180.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g41025 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436774g0020 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp4g01480.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Nbi_g29313 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32849 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002792 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=1-2232 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009732 ATWBC11, ABCG11,... not classified & original description: CDS=1-2835 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018814 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=31-2163 0.03 OrthoFinder output from all 47 species
Sam_g27657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g072100.3.1 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e006437_P002 Zm00001e006437 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e034438_P001 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 36 187
IPR013525 ABC_2_trans 355 564
No external refs found!