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  5. Ore_g30828

Ore_g30828 (VPS60.1)


Aliases : VPS60.1

Description : associated protein of ESCRT-III complex *(VPS60) & original description: none


Gene families : OG0002554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002554_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g30828

Target Alias Description ECC score Gene Family Method Actions
Aev_g05834 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species
LOC_Os05g01250.1 VPS60.1, LOC_Os05g01250 VPS60 associated protein of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Msp_g03877 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 83 278
No external refs found!