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  5. Ore_g30776

Ore_g30776


Description : light chain of clathrin triskelion & original description: none


Gene families : OG0002188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g30776

Target Alias Description ECC score Gene Family Method Actions
Adi_g059492 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37421 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45363 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09281 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03560 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08290 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g58240.1 LOC_Os04g58240 light chain of clathrin triskelion 0.03 OrthoFinder output from all 47 species
Lfl_g05289 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g03080.1 No alias light chain of clathrin triskelion 0.02 OrthoFinder output from all 47 species
Nbi_g02810 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007566 No alias light chain of clathrin triskelion & original... 0.03 OrthoFinder output from all 47 species
Smo107473 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Solyc02g078540.4.1 Solyc02g078540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g006510.4.1 Solyc03g006510 light chain of clathrin triskelion 0.03 OrthoFinder output from all 47 species
Solyc07g054180.4.1 Solyc07g054180 light chain of clathrin triskelion 0.02 OrthoFinder output from all 47 species
Spa_g04777 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e041946_P001 Zm00001e041946 light chain of clathrin triskelion 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA Interproscan
CC GO:0030132 clathrin coat of coated pit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004592 pantoate-beta-alanine ligase activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005785 signal recognition particle receptor complex IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000996 Clathrin_L-chain 217 356
No external refs found!