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Description : not classified & original description: none
Gene families : OG0005152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005152_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g30180 | |
| Cluster | HCCA: Cluster_78 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00182p00053870 | evm_27.TU.AmTr_v1... | No description available | 0.1 | OrthoFinder output from all 47 species | |
| AT3G51230 | No alias | BEST Arabidopsis thaliana protein match is:... | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g016515 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g37632 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38808 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g12208 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g51690 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Aop_g08206 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Aop_g63946 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene00922.t1 | Aspi01Gene00922 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene61927.t1 | Aspi01Gene61927 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.11G031400.1 | Ceric.11G031400 | not classified & original description: pacid=50595031... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.1Z073500.1 | Ceric.1Z073500 | not classified & original description: pacid=50586247... | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g03833 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01018782001 | No alias | No description available | 0.07 | OrthoFinder output from all 47 species | |
| Gb_14634 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g42660.1 | LOC_Os10g42660 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| Len_g15733 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g25652 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_27772g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| MA_954115g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g15450.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g07779 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g38054 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Nbi_g07476 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013080 | No alias | not classified & original description: CDS=50-1519 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14110 | No alias | not classified & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Solyc02g062170.3.1 | Solyc02g062170 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g083890.4.1 | Solyc02g083890 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g40625 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g41301 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e002472_P001 | Zm00001e002472 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e012997_P002 | Zm00001e012997 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031167 | rRNA methylation | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | HCCA |
| BP | GO:0070475 | rRNA base methylation | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |