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  5. Ore_g30007

Ore_g30007 (ATGCP4, GCP4)


Aliases : ATGCP4, GCP4

Description : component *(GCP4) of gamma-Tubulin ring complex & original description: none


Gene families : OG0005059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005059_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g30007

Target Alias Description ECC score Gene Family Method Actions
AT3G53760 ATGCP4, GCP4 GAMMA-TUBULIN COMPLEX PROTEIN 4 0.04 OrthoFinder output from all 47 species
Ala_g23192 ATGCP4, GCP4 component *(GCP4) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z281100.1 ATGCP4, GCP4,... component *(GCP4) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
Gb_14684 ATGCP4, GCP4 component GCP4 of gamma-Tubulin ring complex (gamma-TuRC) 0.03 OrthoFinder output from all 47 species
MA_2496g0010 ATGCP4, GCP4 Gamma-tubulin complex component 4 homolog OS=Medicago... 0.03 OrthoFinder output from all 47 species
Mp7g15510.1 ATGCP4, GCP4 component GCP4 of gamma-Tubulin ring complex (gamma-TuRC) 0.02 OrthoFinder output from all 47 species
Sam_g48975 No alias component *(GCP4) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
Spa_g07390 ATGCP4, GCP4 component *(GCP4) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043015 gamma-tubulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR040457 GCP_C 385 711
IPR041470 GCP_N 2 380
No external refs found!